Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923663.1_cds_XP_016472216.1_64472
CDS Infomation

[gene=LOC107794251] [db_xref=GeneID:107794251] [protein=bifunctional dihydrofolate reductase-thymidylate synthase-like] [protein_id=XP_016472216.1] [location=join(21325..21752,21827..22226,22584..22628,22759..22824,22975..23036,23115..23189,23281..23446,23524..23647,24105..24211,24296..24406)] [gbkey=CDS]
Sequence

ATGGCCAGTGAAACAATTACAGGCCTTTCCAATGGTAGCATCAATGCTCATTCTACTCCA
CAAAGGACTTACCAGGTTGTAGTTGCTGCAACTCGAAATATGGGTATTGGTAAGGAGGGG
AAGTTGCCTTGGAGATTGCCTTCAGATCTCAAGTTCTTCAAGGGTATCACTGGGACTACG
TCAGATCCTTCAAGAAAGAATGCTGTTATTATGGGTAGAAAGACTTGGGAAAGTATTCCT
CTTGAATATCGCCCTCTTCCTGGCCGCCTCAATGTTGTTCTCACACGTTCAGGGAGTTTT
GACATTGCTACAGCAGAAAATGTTGTCATATGCGGAAGTTTAGGTTCTGCTCTTCAACTA
TTGGCAGCCTCACCTTATGGTCTCTCAATAGAGAACGTGTTTGTTATAGGAGGTGGCGAG
ATTTTCAGAGATTCCCTAAATGCTCATGGGTGTGATGCAATCCATATCACTGAAATTGAG
ACTGATATTGAATGTGATACTTTTATTCCTGCTATTGAAACCTCGGTATTTCAACCCTGG
TACTCATCATTTCCGGTGGTTGAAAATAAGATTCGCTATTCTTTTACCACCTATGTCCGT
GTGAAGAATTCTGAAGTAGAAACTGTTAATCAGGCAAATAACGAGACTCCTGAGATTGGT
TCAGATTCTTTTAATGTTGAGGTTAAAGCATTCTCCTTCTTGCCTAAAATGATATTTGAG
AAACATGAAGAATACATGTACCTGAGACTGATTGAAGAGATCATCTCGAATGGCATGCCA
AAGGATGACAGGACTGGCACTGGTACTTTGTCAAAATTTGGTTGCCAGATGAGGTTCAAT
TTGCGTAAATCATTTCCCCTTCTTACAACAAAGAAAGTTTTTTGGAGAGGCGTCCTTGAA
GAACTCTTGTGGTTCATCAGTGGATCAACAAGTGCTAAGGTCCTACAAGAGAAGGGCATT
CATATTTGGGATGGCAATGCATCCAGAGAGTATCTTGATAGTATTGGCTTGAAGGACAGG
GAAGAGGGTGATTTGGGACCAGTATATGGGTTTCAGTGGAGGCATTTTGGTGCCAGGTAC
ATTGACATGCATACTGACTACAGTGGCCAAGGGTTTGACCAATTGGCTGATGTTATCAAC
AAAGTTAAAAACAATCCAGATGACAGACGTATTATTCTTTCAGCTTGGAATCCGTCTGAT
CTTAAACTGATGGCGCTCCCACCTTGTCACATGTTTGCTCAGTTCTATGTAGCCAACGGG
GAGTTATCCTGTCAGATGTATCAGCGATCTGCTGATATGGGTCTGGGAGTGCCATTTAAC
ATTGCATCTTATGCGTTGCTGACATGCATGATAGCTCATGTTTCTGACCTAGTTCCTGGT
GATTTCGTCCATGTCATTGGAGATGCTCATGTTTACCGCACTCATGTCAGACCTCTGCAA
GACCAGCTTCAGAAGTTACCGAGACCTTTCCCAGTGCTGAAGATCAATTCACAGAAAAAG
GATATAGATTCCTTTGTTGCTGCAGACTTTAAACTTGTTGGTTATGATCCTCACCAGAAA
ATAGAAATGAAAATGGCGATATGA

Peptide Sequence

PEP ID

XP_016472216.1
PEP Infomation

PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Nicotiana tabacum]
Sequence

MASETITGLSNGSINAHSTPQRTYQVVVAATRNMGIGKEGKLPWRLPSDLKFFKGITGTT
SDPSRKNAVIMGRKTWESIPLEYRPLPGRLNVVLTRSGSFDIATAENVVICGSLGSALQL
LAASPYGLSIENVFVIGGGEIFRDSLNAHGCDAIHITEIETDIECDTFIPAIETSVFQPW
YSSFPVVENKIRYSFTTYVRVKNSEVETVNQANNETPEIGSDSFNVEVKAFSFLPKMIFE
KHEEYMYLRLIEEIISNGMPKDDRTGTGTLSKFGCQMRFNLRKSFPLLTTKKVFWRGVLE
ELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARY
IDMHTDYSGQGFDQLADVINKVKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANG
ELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVSDLVPGDFVHVIGDAHVYRTHVRPLQ
DQLQKLPRPFPVLKINSQKKDIDSFVAADFKLVGYDPHQKIEMKMAI

Transcript Sequence

Gene sequence data has not been registered.